Book a hotel near Shelter Island, Point Loma

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Hotels near Shelter Island

Kona Kai San Diego

Kona Kai San Diego

4 out of 5
1551 Shelter Island Drive San Diego CA
Free cancellation
Reserve now, pay when you stay
0.24 km from Shelter Island
The price is CA $207 per night
CA $207
CA $321 total
Jan 10 - Jan 11, 2026
includes taxes & fees
Book a stay at this beach hotel in San Diego. Enjoy free WiFi, 2 outdoor pools, and a full-service spa. Our guests praise the helpful staff in our reviews. Popular attractions Port of San Diego and Petco Park are located nearby.
On private beach
Pool
Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina

3 out of 5
2051 Shelter Island Dr San Diego CA
Free cancellation
Reserve now, pay when you stay
0.4 km from Shelter Island
The price is CA $158 per night
CA $158
CA $181 total
Jan 4 - Jan 5, 2026
includes taxes & fees
Stay at this hotel in San Diego. Enjoy free WiFi, 2 outdoor pools, and a marina. Our guests praise the pool and the restaurant in our reviews. Popular attractions Port of San Diego and Petco Park are located nearby.
Pool
Hot tub
Bay Club Hotel & Marina

Bay Club Hotel & Marina

3.5 out of 5
2131 Shelter Island Dr San Diego CA
Free cancellation
Reserve now, pay when you stay
0.7 km from Shelter Island
The price is CA $172 per night
CA $172
CA $198 total
Dec 18 - Dec 19
includes taxes & fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, a marina, and a health club. Our guests praise the breakfast and the restaurant in our reviews. Popular attractions Port of San Diego and Petco Park are located nearby.
Pool
Hot tub
Humphreys Half Moon Inn

Humphreys Half Moon Inn

3.5 out of 5
2303 Shelter Island Dr San Diego CA
Free cancellation
Reserve now, pay when you stay
0.97 km from Shelter Island
The price is CA $205 per night
CA $205
CA $263 total
Dec 14 - Dec 15
includes taxes & fees
Book a stay at this business-friendly hotel in San Diego. Enjoy a marina, a nightclub, and breakfast (surcharge). Our guests praise the pool and the restaurant in our reviews. Popular attractions Port of San Diego and Petco Park are located nearby.
Pool
Hot tub
Sea Harbor Hotel

Sea Harbor Hotel

2 out of 5
1325 Scott St San Diego CA
Free cancellation
Reserve now, pay when you stay
1.36 km from Shelter Island
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Stay at this hotel in San Diego. Enjoy free WiFi, a marina, and parking (surcharge). Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Port of San Diego and Mission Bay are located nearby.
Pool
Pet-friendly
Hotel Point Loma

Hotel Point Loma

2 out of 5
2933 Fenelon St. San Diego CA
Free cancellation
Reserve now, pay when you stay
1.49 km from Shelter Island
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Stay at this hotel in San Diego. Enjoy free WiFi, parking (surcharge), and daily housekeeping. Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Port of San Diego and Mission Bay are located nearby.
Pet-friendly
Free WiFi
Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport

3 out of 5
1403 Rosecrans St San Diego CA
Free cancellation
Reserve now, pay when you stay
1.55 km from Shelter Island
The price is CA $123 per night
CA $123
CA $141 total
Dec 21 - Dec 22
includes taxes & fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free breakfast, free WiFi, and free parking. Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Port of San Diego and Mission Bay are located nearby.
Pool
Breakfast included
The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton

3.5 out of 5
2912 Garrison St San Diego CA
Free cancellation
Reserve now, pay when you stay
1.58 km from Shelter Island
The price is CA $175 per night
CA $175
CA $201 total
Dec 21 - Dec 22
includes taxes & fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, breakfast (surcharge), and room service. Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Port of San Diego and Mission Bay are located nearby.
Pet-friendly
Free WiFi
Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor

3.5 out of 5
San Diego CA
Free cancellation
Reserve now, pay when you stay
1.64 km from Shelter Island
The price is CA $115 per night
CA $115
CA $130 total
Jan 5 - Jan 6, 2026
includes taxes & fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free breakfast, a rooftop terrace, and parking (surcharge). Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Port of San Diego and Mission Bay are located nearby.
Pool
Breakfast included
Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel

2.5 out of 5
5005 N Harbor Dr San Diego CA
Free cancellation
Reserve now, pay when you stay
1.67 km from Shelter Island
The price is CA $135 per night
CA $135
CA $155 total
Dec 14 - Dec 15
includes taxes & fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free breakfast, free WiFi, and free parking. Our guests praise the breakfast and the pool in our reviews. Popular attractions Port of San Diego and Mission Bay are located nearby.
Pool
Hot tub
Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island

3.5 out of 5
1960 Harbor Island Drive San Diego CA
Free cancellation
Reserve now, pay when you stay
2.47 km from Shelter Island
The price is CA $225 per night
CA $225
CA $258 total
Dec 25 - Dec 26
includes taxes & fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, breakfast (surcharge), and a free airport shuttle. Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Port of San Diego and Petco Park are located nearby.
Pool
Free airport shuttle
Sheraton San Diego Resort

Sheraton San Diego Resort

4 out of 5
1380 Harbor Island Dr San Diego CA
Free cancellation
Reserve now, pay when you stay
3.5 km from Shelter Island
The price is CA $129 per night
CA $129
CA $198 total
Jan 2 - Jan 3, 2026
includes taxes & fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, 3 outdoor pools, and 5 restaurants. Our guests praise the pool and the restaurant in our reviews. Popular attractions Port of San Diego and Petco Park are located nearby.
Pool
Hot tub
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Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

About Shelter Island Hotels Near Attractions

Do you have a full travel itinerary while visiting Shelter Island? Don't waste your time commuting too far from Shelter Island area attractions.

Shelter Island hotels essential information

Accommodation
7,265 hotels
Lowest Price
CA $130
Highest Price
CA $321
Popular hotels
Bay Club Hotel & Marina, Comfort Inn San Diego Airport At The Harbor, Best Western Plus Island Palms Hotel & Marina, Kona Kai San Diego, Humphreys Half Moon Inn, The Monsaraz San Diego, Tapestry Collection by Hilton, Sheraton San Diego Resort, Sea Harbor Hotel, Ramada by Wyndham San Diego Airport, Hilton San Diego Airport/Harbor Island, Best Western Yacht Harbor Hotel, Hotel Point Loma

Recent Shelter Island hotel reviews by fellow wanderers

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina

5 out of 5
Posted 2 days ago
Travelocity Verified Review
"We have a great time "
A verified traveller stayed at Best Western Plus Island Palms Hotel & Marina
Best Western Plus Island Palms Hotel & Marina

Types of hotels

Hotels near…

Areas of Shelter Island